django-mbrowse models

class mbrowse.models.models_general.AdductRule(id, adduct_type, nmol, charge, massdiff, oidscore, quasi, ips, frag_score)

exception DoesNotExist

exception MultipleObjectsReturned

class mbrowse.models.models_general.MFile(id, data_file, original_filename, user, genericfile_ptr, run, mfilesuffix, prefix)

exception DoesNotExist

exception MultipleObjectsReturned

class mbrowse.models.models_general.MFileSuffix(id, suffix)

exception DoesNotExist

exception MultipleObjectsReturned

class mbrowse.models.models_general.MetabInputData(id, date, gfile)

exception DoesNotExist

exception MultipleObjectsReturned

class mbrowse.models.models_general.Polarity(id, polarity)

exception DoesNotExist

exception MultipleObjectsReturned

class mbrowse.models.models_general.Run(id, prefix, polarity)

exception DoesNotExist

exception MultipleObjectsReturned

class mbrowse.models.models_cpeaks.Adduct(id, idi, adductrule, cpeakgroup, neutralmass)

exception DoesNotExist

exception MultipleObjectsReturned

class mbrowse.models.models_cpeaks.CPeak(id, idi, mz, mzmin, mzmax, rt, rtmin, rtmax, _into, intb, maxo, sn, rtminraw, rtmaxraw, xcmsfileinfo)

exception DoesNotExist

exception MultipleObjectsReturned

class mbrowse.models.models_cpeaks.CPeakGroup(id, idi, mzmed, mzmin, mzmax, rtmed, rtmin, rtmax, npeaks, isotopes, adducts, pcgroup, msms_count, cpeakgroupmeta, best_annotation, best_score)

exception DoesNotExist

exception MultipleObjectsReturned

class mbrowse.models.models_cpeaks.CPeakGroupLink(id, cpeak, cpeakgroup, best_feature)

exception DoesNotExist

exception MultipleObjectsReturned

class mbrowse.models.models_cpeaks.CPeakGroupMeta(id, date, metabinputdata)

exception DoesNotExist

exception MultipleObjectsReturned

class mbrowse.models.models_cpeaks.Eic(id, idi, scan, intensity, rt_raw, rt_corrected, purity, cpeak, cpeakgroup, eicmeta)

exception DoesNotExist

exception MultipleObjectsReturned

class mbrowse.models.models_cpeaks.EicMeta(id, metabinputdata)

exception DoesNotExist

exception MultipleObjectsReturned

class mbrowse.models.models_cpeaks.Isotope(id, idi, cpeakgroup1, cpeakgroup2, iso, charge, metabinputdata)

exception DoesNotExist

exception MultipleObjectsReturned

class mbrowse.models.models_cpeaks.NeutralMass(id, idi, nm, ips, metabinputdata)

exception DoesNotExist

exception MultipleObjectsReturned

class mbrowse.models.models_cpeaks.SPeakMetaCPeakFragLink(id, cpeak, speakmeta)

exception DoesNotExist

exception MultipleObjectsReturned

class mbrowse.models.models_cpeaks.XCMSFileInfo(id, idi, filename, classname, mfile, metabinputdata)

exception DoesNotExist

exception MultipleObjectsReturned

class mbrowse.models.models_speaks.SPeak(id, speakmeta, mz, i)

exception DoesNotExist

exception MultipleObjectsReturned

class mbrowse.models.models_speaks.SPeakMeta(id, run, idi, scan_idi, precursor_mz, precursor_i, scan_num, precursor_scan_num, precursor_nearest, precursor_rt, ms_level, metabinputdata, a_mz, a_purity, a_pknm, i_mz, i_purity, i_pknm, in_purity, in_pknm)

exception DoesNotExist

exception MultipleObjectsReturned

class mbrowse.models.models_libraries.LibrarySpectra(id, library_spectra_meta, mz, i, other)

exception DoesNotExist

exception MultipleObjectsReturned

class mbrowse.models.models_libraries.LibrarySpectraMeta(id, name, collision_energy, ms_level, accession, resolution, polarity, fragmentation_type, precursor_mz, precursor_type, instrument_type, instrument, copyright, column, mass_accuracy, mass_error, origin, library_spectra_source, inchikey)

exception DoesNotExist

exception MultipleObjectsReturned

class mbrowse.models.models_libraries.LibrarySpectraSource(id, name, description)

exception DoesNotExist

exception MultipleObjectsReturned

class mbrowse.models.models_compounds.Compound(created_at, updated_at, inchikey_id, name, systematic_name, iupac_name, trade_name, other_names, molecular_formula, smiles, pubchem_id, chemspider_id, kegg_id, hmdb_id, lmdb_id, lbdb_id, humancyc_id, chebi_id, metlin_id, foodb_id, monoisotopic_mass, exact_mass, molecular_weight, xlogp, category, compound_class, sub_class, FA, brite)

exception DoesNotExist

exception MultipleObjectsReturned

class mbrowse.models.models_annotations.CAnnotation(id, compound, cpeakgroup, spectral_matching_average_score, metfrag_average_score, mzcloud_average_score, sirius_csifingerid_average_score, ms1_average_score, weighted_score, rank)

exception DoesNotExist

exception MultipleObjectsReturned

class mbrowse.models.models_annotations.CAnnotationWeight(id, spectral_matching_weight, mzcloud_weight, sirius_csifingerid_weight, ms1_weight, metfrag_weight)

exception DoesNotExist

exception MultipleObjectsReturned

class mbrowse.models.models_annotations.CSIFingerIDAnnotation(id, idi, s_peak_meta, inchikey2d, molecular_formula, rank, score, name, links, smiles, rank_score, csifingeridmeta)

exception DoesNotExist

exception MultipleObjectsReturned

class mbrowse.models.models_annotations.CSIFingerIDMeta(id, datetime_stamp)

exception DoesNotExist

exception MultipleObjectsReturned

class mbrowse.models.models_annotations.MetFragAnnotation(id, idi, s_peak_meta, explained_peaks, formula_explained_peaks, maximum_tree_depth, fragmentor_score, fragmentor_score_values, number_peaks_used, score, compound)

exception DoesNotExist

exception MultipleObjectsReturned

class mbrowse.models.models_annotations.ProbmetabAnnotation(id, idi, cpeakgroup, compound, prob)

exception DoesNotExist

exception MultipleObjectsReturned

class mbrowse.models.models_annotations.SpectralMatching(id, idi, s_peak_meta, score, percentage_match, match_num, library_spectra_meta, accession, name)

exception DoesNotExist

exception MultipleObjectsReturned